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The Dataset Collection
by Renan Vieira
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Replication Package of the paper "From Reports to Bug-Fix Commits: A 10 Years Dataset of Bug-Fixing Activity from 55 Apache's Open Source Projects" ABSTRACT: Bugs appear in almost any software development. Solving all or at least a large part of them requires a great deal of time, effort, and budget. Software projects typically use issue tracking systems as a way to report and monitor bug-fixing tasks. In recent years, several researchers have been conducting bug tracking analysis to...
Source: https://figshare.com/articles/dataset/Replication_Package_-_PROMISE_19/8852084/4
The Dataset Collection
by Soon-Chun Jeong; Myung-Shin Kim; Ji Hong Kim; Youn Young Hur
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Candidate SNP variants detected by analysis of genome resequencing data from 33 grape accessions
Source: https://figshare.com/articles/dataset/33Grapes_Total_SNP_final_chr06_vcf_gz/8116106/1
The data are packaged together into network common data form (netCDF) files. Three separate files are available, with data provided separately for each season: (1) best estimates of the generalized extreme value (GEV) distribution coefficients as well as bootstrap standard errors, (2) 10-, 20-, 50-, and 100-year return values (with bootstrap standard errors) for 1955, 1965, 1975, 1985, 1995, 2005, and 2015, and (3) smoothed bootstrap estimates (250 total) for each GEV coefficient (these are...
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/LULNUQ&version=3.0
Journals
by David Yokum, Anita Ravishankar, Alexander Coppock
texts

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Abstract:  Police body-worn cameras (BWCs) have been widely promoted as a technological mechanism to improve policing and the perceived legitimacy of police and legal institutions, yet evidence of their effectiveness is limited. To estimate the effects of BWCs, we conducted a randomized controlled trial involving 2,224 Metropolitan Police Department officers in Washington, DC. Here we show that BWCs have very small and statistically insignificant effects on police use of force and civilian...
The Dataset Collection
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In this study, Beijing, the capital of China, is selected as the study area. Hourly mean concentrations of six regulatory air pollutants including O3 (μg/m3), SO2 (μg/m3), NO2 (μg/m3), PM2.5 (μg/m3), PM10 (μg/m3), and CO (mg/m3) were collected from 35 air quality monitoring stations labeled by 1 to 35 from 01/01/2017 to 05/30/2018. The data was provided by the Ministry of Environmental Protection (MEP) of China. Hourly averaged meteorological data in the same period were first accessed...
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/USXCAK&version=1.0
The Dataset Collection
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Pangenome analysis Limnohabitans MAGs and reference genomes as conducted with Anvi'o v2.3.0. One pangenome analysis was conducted with only the MAGs (folder panG-LIM-MI), another one with both MAGs and reference genomes (folder panG-LIM-ALL).
Source: https://figshare.com/articles/dataset/Anvi_o_pangenome_analysis_of_Limnohabitans_MAGs_and_genomes/7547159/1
The Dataset Collection
by Tony Chu; Kidder, Larry; Pfeiffer, Harald; Scheel, Mark; Boyle, Michael; Hemberger, Dan; Lovelace, Geoffrey; Szilagyi, Bela
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3274549
The Dataset Collection
by SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3275054
The Dataset Collection
by SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3319012
The Dataset Collection
by SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3322275
The Dataset Collection
by SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3275525
The Dataset Collection
by Jonathan Blackman; SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3272877
The Dataset Collection
by SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3303264
The Dataset Collection
by SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/2555762
The Dataset Collection
by Kevin Barkett; SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3303728
The Dataset Collection
by Matt Giesler; SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3307421
The Dataset Collection
by Matt Giesler; SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/2639767
The Dataset Collection
by SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/2641009
The Dataset Collection
by SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3307711
The Dataset Collection
by SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3273341
The Dataset Collection
by Foucart, Francois; Williamson, Andrew; Kidder, Larry; Haas, Roland; Hinderer, Tanja; Hemberger, Dan; Duez, Matthew; Scheel, Mark; Pfeiffer, Harald; Buonanno, Alessandra; Boyle, Michael
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Simulation of a black-hole neutron-star binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3337268
The Dataset Collection
by Atticus Stovall
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Data for: Tree height explains mortality risk during an intense drought https://rdcu.be/bU8go Tree-level Information Zone: tree ID number Zmax: tree height (m) Count: integer value (1) Yearly Pixel-based Mortality Estimates mort2009: % of “dead” pixels in 2009 mort2010: as above for 2010 mort2012: as above for 2012 mort2014: as above for 2014 mort2016: as above for 2016 Tree-level Mortality Estimates x: x coordinate (UTM Zone 11N) y: y coordinate (UTM Zone 11N) dead: 0 = Live; 1 = Dead,...
Source: https://figshare.com/articles/dataset/CA_lidar_tree_mortality/7609193/4
The Dataset Collection
by figshare admin cellimagelibrary
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Electron micrograph of the cell body of a 0.25 um thick section through a cortical pyramidal neuron from the brain of a patient with Alzheimer's disease. The specimen was prepared from biopsy material obtained several decades ago.
Source: https://cellimagelibrary.figshare.com/articles/dataset/CCDB_6354_jpg/8142092/1
The Dataset Collection
by figshare admin cellimagelibrary
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Single computed slice through a tomographic reconstruction of a protoplasmic astrocyte in a 0.5 um thick section from the hippocampus of a 1 month old male mouse, imaged with intermediate voltage electron microscopy. This reconstruction is the 14th in a series of 26 serial reconstructions through the cell soma. The complete reconstruction can be viewed under MP7503.
Source: https://cellimagelibrary.figshare.com/articles/dataset/CCDB_6727_jpg/8179529/1
The Dataset Collection
by figshare admin cellimagelibrary
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Single computed slice through a tomographic reconstruction of a protoplasmic astrocyte in a 0.5 um thick section from the hippocampus of a 1 month old male mouse, imaged with intermediate voltage electron microscopy. This reconstruction is the 22nd in a series of 26 serial reconstructions through the cell soma. The complete reconstruction can be viewed under MP7503.
Source: https://cellimagelibrary.figshare.com/articles/dataset/CCDB_6736_jpg/8184362/1
The Dataset Collection
by Benedikt Geier
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CLSM of the main dataset "MPIMM_054_QE_P_BP_CF" apllying FISH after AP-MALDI-MSI and after widefield fluorescence overviews were made
Source: https://figshare.com/articles/dataset/CLSM_of_FISH_sample/6887315/2
The Dataset Collection
by Shunliu Zhao; Matthew G. Russell; Amir Hakami; Shannon L. Capps; Matthew D. Turner; Daven K. Henze; Peter B. Percell; Jaroslav Resler; Huizhong Shen; Armistead G. Russell; Athanasios Nenes; Amanda J. Pappin; Sergey L. Napelenok; Jesse O. Bash; Kathleen M. Fahey; Gregory R. Carmichael; Charles O. Stanier; Tianfeng Chai
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The data set that is used for testing the adjoint model.
Source: https://zenodo.org/record/3473444
Bulk Bibliographic Metadata
by CORE.ac.uk
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Mirrored from: https://core.ac.uk/documentation/dataset CORE Dataset to Microsoft Academic Graph (MAG) mapping (80MB compressed, 173 MB in total) - 8.9M items License: Open Data Commons Attribution (ODC-By) license.
The Dataset Collection
by James Watson; Oscar Venter; Andrew Hansen; MC Hansen; Kevin Barnett; Linda Phillips; Patrick Jantz; Patrick Burns; Scott Aktinson; Susana Rodríguez-Buritica; Jamison Ervin; Anne Virnig; Scott Goetz; Christina Supples
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GeoTIFF representing canopy cover for the moist broadleaf biome of the humid tropics in South America. Derived from remotely sensed imagery, this layer is used as an input into the forest structural condition index
Source: https://springernature.figshare.com/articles/dataset/Canopy_Cover_-_South_America/8411858/1
The Dataset Collection
by Katarina Kleinova
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The CT data of Zootoca vivipara NHMW 32438-1 from Čerňanský and Syromyatnikova Plos One. It can by open by winrar and volume graphics.
Source: https://figshare.com/articles/dataset/Cernansky_and_Syromyatnikova_Zootoca_vivipara_NHMW_32438-1/8396822/1
The Dataset Collection
by saman farahmand; Todd Riley; Kourosh Zarringhalam
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the annotated ChIP network ans well as annotated TRRUST database which are annotated by modEx system.
Source: https://figshare.com/articles/dataset/ChIPfilter-1K-950_rels_result_csv/8251502/1
The Dataset Collection
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Assembled transcriptome, and predicted non-redundant proteins it encodes, for the choanoflagellate Choanoeca flexa.
Source: https://figshare.com/articles/dataset/Choanoeca_flexa_nonredundant_predicted_proteins_fasta/8216291/2
The Dataset Collection
by Zong Qin; Ying-Ju Lin; Fang-Cheng Lin; Yi-Pai Huang
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An image database dedicated to color breakup evaluation, which contains 25 FHD references images that cover various image content.
Source: https://opticapublishing.figshare.com/articles/dataset/Color_Breakup_Image_Database_zip/7223039/1
Dioxin response elements were computationally identified and matrix similarity scores estimated as previously described (PMIDs: 15328365, 21762485, and 26582802) CC0 Waiver
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/JASCVZ&version=1.0
Bulk Bibliographic Metadata
by Crossref
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This file is a snapshot dump of the Crossref DOI metadata API, containing entries for over 107 million DOIs. This was generated by running the scripts at: https://github.com/greenelab/crossref (git commit: 768a49ba1d8ba1971f00471950514716a9f699c8) The script started on 2019-09-09 and completed on 2019-10-06. Format is xz-compressed JSON (one JSON object per line).
The Dataset Collection
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This dataset contains protostome peptide sequences that have been used to test the validity of deuterostome specific orthologous groups. BLAST was used to find potential homologous protostome sequences that could invalidate the specificity of the deuterostome orthogroups in question.
Source: https://zenodo.org/record/2650166
The Dataset Collection
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Liu, C., Comte, L., Xian, W., Chen, Y. and Olden, J. D. Current and projected future risks of freshwater fish invasions in China. Ecography. doi: 10.1111/ecog.04665 The high-resolution maps of habitat suitability for all species under current and future (2050s and 2070s) climatic scenarios. For more information see readme file (readme_habitat_suitability_maps.txt)
Source: https://figshare.com/articles/dataset/Current_and_projected_future_risks_of_freshwater_fish_invasions_in_China/9751934/1
The Dataset Collection
by Niklas König Ignasiak; Deepak K Ravi; Stefan Orter; Seyyed Hamed Hosseini Nasab; William R Taylor; Navrag Singh
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Gait variability is a sensitive metric for assessing functional deficits in individuals with mobility impairments. To correctly represent the temporal evolution of gait kinematics, nonlinear measures require extended and uninterrupted time series. The full-body gait patterns of twenty healthy subjects were captured during five walking trials (at least 5 minutes) on a treadmill under different weight perturbation conditions with both weight reductions (of 40 and 20% using a harness labelled...
Source: https://figshare.com/articles/dataset/Does_variability_of_footfall_kinematics_correlate_with_dynamic_stability_of_the_centre_of_mass_during_walking_/8153819/3
DIRECT-OA-CRAWL-2019
DIRECT-OA-CRAWL-2019
collection
2,566
ITEMS
5.1M
VIEWS
by Internet Archive Web Group
collection

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Bulk Bibliographic Metadata
by DIrectory of Open Access Journals
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From: https://doaj.org/public-data-dump
Bulk Bibliographic Metadata
by DIrectory of Open Access Journals
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Downloaded from https://doaj.org/csv and the OAI-PMH interface. File names encode the date when data was downloaded.
The Dataset Collection
by Sebastian Micluța-Câmpeanu
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This is the database containing the data to reproduce the plots in the DS19 presentation of the author. This is just a test version.
Source: https://figshare.com/articles/dataset/DS19_test_database/8078699/1
The Dataset Collection
by Elisha Roberson
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This is an annotated list of potential CasX (Cas12e) editing sites based on Ensembl Release 95 for Danio rerio . The sites are annotated with location contig, start, end, target sequence, PAM sequence, uniqueness among editing sites, and overlaps with known exons.
Source: https://figshare.com/articles/dataset/Danio_rerio_CasX_sites/7853219/1
The Dataset Collection
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The data are for the manuscript submitted to Journal of Geophysical Research-Atmospheres on 15th, August, 2019 by Huiyan Xu. 
Source: https://zenodo.org/record/4059012
The Dataset Collection
by peng zhan
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The data for studying the circulation dynamics and residence time of a lagoon in the Red Sea coast.
Source: https://figshare.com/articles/dataset/Data_RT_TRSP/11038790/1
Optotrak recordings of Fitts task paradigm as presented in Valk et al. (2019) 'During rhythmic pointing, joint-angles are temporary linked in different synergies with similar relative joint-angle coupling across task constraints'
Source: https://figshare.com/articles/dataset/Dataset_During_rhythmic_pointing_joint-angles_are_temporary_linked_in_different_synergies_with_similar_relative_joint-angle_coupling_across_task_constraints_/8280893/1
The Dataset Collection
by emmanuel levy; Benjamin Dubreuil
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Supplementary Dataset from the work "Rules of amino acid composition by which disordered regions adjust to high expression". This table contains amino-acid level information of human proteins.
Source: https://figshare.com/articles/dataset/Dataset_2_2_Human_amino-acids_raw_data/8058854/1
The Dataset Collection
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Filtered genotype calls from high coverage sequencing data of Alca Tarma (LOP-868), IVP101, PL4, and three selected dihaploids
Source: https://figshare.com/articles/dataset/Dataset_S3_tsv_Genomic_outcomes_of_haploid_induction_crosses_in_potato/10052357/1
The Dataset Collection
by Geonhwa You
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De facto population data in Seoul, South Korea in 2018.
Source: https://figshare.com/articles/dataset/De_facto_population_data_in_2018/10272551/2
The Dataset Collection
by Francisco Correa
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transcriptome denovo
Source: https://figshare.com/articles/dataset/De_novo_transcriptome_assembly/9971546/1
The Dataset Collection
by Martin Jinye Zhang
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Toy data for the diversity score analysis in Tabula Muris Senis
Source: https://figshare.com/articles/dataset/Diversity_score_toy_data/11340128/1
The Dataset Collection
by Ben Dichter; Edward F Chang
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The enclosed data is collected using a high-density 256-channel electrocorticography array implanted in a human patient during treatment for epilepsy. The subjects are reading aloud consonant-vowel syllables from a list. The data was collected by Dr. Edward Chang at the University of California, San Francisco, and curated by Ben Dichter. Data is organized by subject ID, and each file is a continuous recording session in Neurodata Without Borders: Neurophysiology (NWB:N) 2.0 format. Voltage...
Source: https://figshare.com/articles/dataset/EC9_B46_nwb/9631880/1
The Dataset Collection
by Steven Peterson
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High-density EEG data recorded during tandem standing and tandem walking at 0.22 m/s. Data includes selected neural independent components, along with EMG from 8 lower leg muscles (4 on each leg). Subjects were exposed to 20 degree visual field rotations in virtual reality (SVZ and WVZ events) and brief mediolateral pull perturbations (Stand_Pull and Walk_Pull events). Each subject has approximately 150 of each event type for both physical conditions (walking and standing). Both EEG.data and...
Source: https://figshare.com/articles/dataset/EEG_connectivity_data_Walk_Pull_/8165747/1
The Dataset Collection
by Hyung Rae Cho; Saehoon Kim
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This file contains the EEG raw data of 14 participants in the laboratory experiment and of 89 participants in the fieldwork in Nangok-dong. As stated in the manuscript, this EEG dataset was analysed to investigated valence values that show positive/negative emotions. This data was analysed by MATLAB and EEGLAB. The EEG raw data of 10 participants in the fieldwork were removed in the final analysis due to the issue of poor connection between laptop and EEG device.
Source: https://figshare.com/articles/dataset/EEG_raw_data_zip/9958946/1
Bulk Bibliographic Metadata
by EZB
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See README for details. Scraped from: http://ezb.uni-regensburg.de/ezeit/services/collections.phtml?bibid=AAAAA&colors=1〈=en http://ezb.uni-regensburg.de/ezeit/services/xmloutput.phtml?bibid=AAAAA&colors=1〈=de#6.2
The Dataset Collection
by cj lortie
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A full scrape of Web of Science examining eco-evo publications indexed from 1990 to 2019. Query from this resource was completed August 2019.
Source: https://figshare.com/articles/dataset/Eco_evo_papers/9843929/2
The Dataset Collection
by Han, Xueyuan
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Preprocessed edgelist data of ta1-fivedirections-e3-official. CC0 Waiver
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/NVQFY0&version=1.0
The Dataset Collection
by André R. A. Marques; Alessandro Di Spiezio; Niklas Thießen; Lina Schmidt; Joachim Grötzinger; Renate Lüllmann-Rauch; Markus Damme; Steffen E. Storck; Claus U. Pietrzik; Jens Fogh; Julia Bär; Marina Mikhaylova; Markus Glatzel; Mahmoud Bassal; Udo Bartsch; Paul Saftig
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CTSD (cathepsin D) is one of the major lysosomal proteases indispensable for the maintenance of cellular proteostasis by turning over substrates of endocytosis, phagocytosis and autophagy. Consequently, CTSD deficiency leads to a strong impairment of the lysosomal-autophagy machinery. In mice and humans CTSD dysfunction underlies the congenital variant (CLN10) of neuronal ceroid lipofuscinosis (NCL). NCLs are distinct lysosomal storage disorders (LSDs) sharing various hallmarks, namely...
Source: https://tandf.figshare.com/articles/dataset/Enzyme_replacement_therapy_with_recombinant_pro-CTSD_cathepsin_D_corrects_defective_proteolysis_and_autophagy_in_neuronal_ceroid_lipofuscinosis/8798045/1
The Dataset Collection
by Line Le Goff; Hugues Chaté; Guy Theraulaz
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Total time spent previously in the neighbourhood of the ant column1 : id of the experience column2 : time (s) column3 : total time spent walking column4 : total time spent stopping column5 : total time spent stopping over the total time
Source: https://figshare.com/articles/dataset/Estimation_of_the_pheromone_concentrations/9981773/1
Bulk Bibliographic Metadata
by EuropePMC
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Data mirrored from https://europepmc.org/downloads Contains a mapping between PubMed IDs (PMID), PubMedCentral IDs (PMCID), and DOI numbers, for over 29 million works.
The Dataset Collection
by Matthew Hiatt
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Data used to generate figures in "Geometry and topology of estuary and braided river channel networks automatically extracted from topographic data"
Source: https://figshare.com/articles/dataset/Exampled_Input_Files_for_LowPath/10324529/1
The Dataset Collection
by Peter Vogt; Kurt H. Riitters; Giovanni Caudullo; Bernd Eckhardt
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This document summarizes the design process, definitions, and algorithmic implementation conducted by the Joint Research Centre to support the development and implementation of FAO’s global forest analysis for the thematic topics Accounting and Fragmentation. The analysis scheme and data products were designed to support the indicator Forest Fragmentation in the State of the World's Forests (SOFO) report 2020. The spatial forest coverage is derived from the Copernicus Global Land Cover 2015...
Source: https://figshare.com/articles/dataset/FAO_gez19_zip/11113325/1
Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
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This item contains bulk metadata exported from https://fatcat.wiki. With the exception of the 'abstracts' file (for which no aggregate license or copyright claims can be made; downstream users are responsible for their use), all metadata here is licensed CC-0 (public domain release) and may be used for any purpose. Downstream users are strongly encouraged to provide attribution and link here to the snapshot, as well as give credit to upstream sources (including Crossref, ORCID, DOAJ, the ISSN...
Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
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Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
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Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
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Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
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Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
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Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
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This item contains a complete PostgreSQL SQL database snapshot from https://fatcat.wiki, in binary 'pg_dump tar mode' format. With the exception of the 'abstracts' table (for which no aggregate license or copyright claims can be made; downstream users are responsible for their use), all metadata here is licensed CC-0 (public domain release) and may be used for any purpose. Downstream users are strongly encouraged to provide attribution and link here to the snapshot, as well as give credit to...
Bulk Bibliographic Metadata
by Internet Archive Web Group
data

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This dump includes all tables (including oauth authentication tables which could be a privacy, but not security, concern). At this time only IA staff have accounts, so the snapshot, which is intended mostly for disaster recovery, is still public.
Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
data

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Bulk Bibliographic Metadata
by Internet Archive Web Group
data

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This item contains a complete PostgreSQL SQL database snapshot from https://fatcat.wiki, in binary 'pg_dump tar mode' format. With the exception of the 'abstracts' table (for which no aggregate license or copyright claims can be made; downstream users are responsible for their use), all metadata here is licensed CC-0 (public domain release) and may be used for any purpose. Downstream users are strongly encouraged to provide attribution and link here to the snapshot, as well as give credit to...
Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
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See README.md
Bulk Bibliographic Metadata
by Internet Archive Web Group
data

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Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
data

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Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
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Fatcat Database Snapshots and Bulk Metadata Exports
by Internet Archive Web Group
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The Dataset Collection
by Raymond Haggerty
data

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Contains all the input and output files used to generate figure 4 IN_[stress].mat are the input files for each stress (glucose, H2O2, KCl) OUT_[stress].mat are the output files run through MISC corresponding to each of the input files.
Source: https://figshare.com/articles/dataset/Figure_4_Reproduction_Files/11383662/1
The Dataset Collection
by Jiyuan An
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Gastroesophageal reflux GWAS identifies risk loci that also associate with subsequent severe esophageal diseases
Source: https://figshare.com/articles/dataset/GERD_GWAS_summary/8986589/1
The Dataset Collection
by Daniel Fischer
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Corresponding gene expression dataset from the GEUVADIS project
Source: https://figshare.com/articles/dataset/GEUVADIS_gene_expression_values/7618538/2
The Dataset Collection
by Abel Gomes
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Gaussian Finder's cavity dataset in CSV. This dataset describes the protein cavities output by a protein cavity detection method called Gaussian Finder. This method is described in the article available at: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-017-1913-4
Source: https://figshare.com/articles/dataset/Gaussian_Finder_s_cavity_dataset_in_CSV/9916745/1
This dataset contains data files and identifiers for original data sources for 39 gene expression datasets from over 7,000 individuals with estrogen receptor positive (ER-positive) Breast Cancer (BC). Background The related study developed a novel in silico approach to assess activation of different signalling pathways. The phosphatidylinositol 3-kinase (PI3K)/AKT/mTOR signalling pathway mediates key cellular functions, including growth, proliferation and survival and is frequently involved in...
Source: https://springernature.figshare.com/articles/dataset/Gene_expression_data_sources_for_in_silico_approach_to_assessing_activation_of_AKT_mTOR_signalling_pathway_in_ER-positive_early_Breast_Cancer/7461776/1
The Dataset Collection
by Fatuma Mzingirwa; Fidalis D. N. Mujibi; Francesca Stomeo; Judith Nyunja; Boaz Kaunda-Arara
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This is a Plink binary files consisting of .ped and .fam. The SNPs were generated at Diversity Array Technology (DArT). Also uploaded is the original data from DArT. The data supports conclusions in the article "Genetic connectivity of the sky emperor, Lethrinus mahsena populations across a gradient of exploitation rates in coastal Kenya".
Source: https://figshare.com/articles/dataset/Genetic_connectivity_of_the_sky_emperor_Lethrinus_mahsena_populations_across_a_gradient_of_exploitation_rates_in_coastal_Kenya_/9755963/2
The Dataset Collection
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The dataset contains genotype (tped and tfam files) and phenotype data GWAS analyses on canine hip dysplasia. See README file for more information.
Source: https://figshare.com/articles/dataset/Genetic_dissection_of_canine_hip_dysplasia_phenotypes_and_osteoarthritis_reveals_three_novel_loci/10096595/1
Genome alignments for data generated in the project " Whole transcriptome analysis of thousands of FACS-sorted single cells with the single cell nanoCAGE protocol – Optimization of the protocol. " Files names indicate unique identifiers of MOIRAI workflow runs, with the following structure: library name, dot, workflow ID (OP-WORKFLOW-CAGEscan-short-reads-v2.0.), dot, timestamp. The raw (FASTQ) data of each library is also deposited in Zenodo ( 10.5281/zenodo.250156 ). Library names...
Source: https://zenodo.org/record/3340196
The Dataset Collection
by Benjamin Judkewitz; Markus Schuelke; Mykola Kadobianskyi; Lisanne Schulze
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FASTA sequence file with the Danionella translucida (DT) assembly scaffolds.
Source: https://springernature.figshare.com/articles/dataset/Genome_assembly_file/8003693/1
The Dataset Collection
by Bolivar Samuel Sosa Madrid; agustin blasco; noelia ibañez escriche
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Genomic Data from divergently selected lines for intramuscular fat in rabbits. This database was used for the analyses of the article titled: "Genomic regions influencing intramuscular fat in divergently selected rabbit lines." Animal Genetics - Journal, accepted in 2019.
Source: https://figshare.com/articles/dataset/Genomic_Data_from_divergently_selected_lines_for_intramuscular_fat_in_rabbits/9934058/2
The Dataset Collection
by Chi Chen; Weike Ye; Yunxing Zuo; Shyue Ping Ong
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This file contains the graph representation of structures in the Materials Project (www.materialsproject.org) and target properties, including formation energy per atom, band gap, and for a subset of 5830 structures, the shear moduli G_{VRH} and bulk moduli K_{VRH}. This data is part of the our paper "Graph Networks as a Universal Machine Learning Framework for Molecules and Crystals". Change log: v3. For the graph dictionaries, we modify the "node" key to "atom"...
Source: https://figshare.com/articles/dataset/Graphs_of_materials_project/7451351/3
The Dataset Collection
by Sebastian Nehrdich
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These are html-tables of  possible quotations/parallel passages within the etexts contained in the gretil-collection. For the code and description see: https://github.com/sebastian-nehrdich/gretil-quotations There is a file called 0_index.html which consists of a table of all html-files and their corresponding text names(which have been scraped from the GRETIL-headers and might look not very readable or complete at times). After unzipping, the files will use about 5.4GB of disk space.
Source: https://zenodo.org/record/2532723
The Dataset Collection
by Chaoxiang Ren
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A part of transcriptome sequencing data of safflower flowers cultivated under different light intensities.
Source: https://figshare.com/articles/dataset/HS3_2_2_fq_gz/8281109/1
The Dataset Collection
by Gary Tse; Christien Ka Hou Li; Sharen Lee; Rachel Wing Chuen Lai; Chengye Yin; Keith Leung; Andrew Li
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Automated analysis of ECGs taken from patients with heart failure of different aetiologies
Source: https://zenodo.org/record/3471486
Bulk Bibliographic Metadata
by Internet Archive Web Group
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This item contains some bulk research affiliation datasets from Internet Archive cataloging efforts. These are mostly strings included in research papers that indicate the institutional affiliations of specific authors (eg, with a home department, university, or company) at the time of publication. These might be useful datasets for efforts to build complete indices of research organizations, or to test normalization code that maps raw strings to organization identifiers. Attribution and links...
Bulk Bibliographic Metadata
by Bruns A, Lenke C, Schmidt C, Taubert NC
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ISSN-GOLD-OA provides a matching list of ISSN for Gold Open Access (OA) journals. The intention was to compile a matching table that is as complete as possible by using different publicly available sources. The data set offers a basis for various journal-related issues in bibliometric studies on Gold OA. The list is an updated version of ISSN-GOLD-OA . For a detailed description of the method, data sources used and the definition of the table fields, please refer to the original...
The Dataset Collection
by Raphaël Nussbaumer; Lionel Benoit; Grégoire Mariethoz; Felix Liechti; Silke Bauer; Baptiste Schmid
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This dataset contains the interpolated values of bird density and bird flight speed (N-S and E-W) resulting from the methodology presented in [reference].The methodology is explained in less detail at  rafnuss-postdoc.github.io/BMM . The resulting interpolation is a probability distribution (define the probability of each value to occurs). Only the median, quantile 10 and 90 are given in this file.  The spatio-temporal grid has a resolution of 0.2° in latitude (43°-68°) and longitude...
Source: https://zenodo.org/record/3243466
Bulk Bibliographic Metadata
by Japan Link Center
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Downloaded from http://japanlinkcenter.org/top/material/material_metadata.html
Bulk Bibliographic Metadata
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This item contains a set of "Keeper's Reports" summarizing journal content preservation coverage from major archival services and networks (Portico, LOCKSS, CLOCKSS).
The Dataset Collection
by Janet Loebach; Kate Tilleczek; Brent Chaisson; Brian Sharp
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The Young Lives Research Laboratory is concerned with the lives of modern youth from education to technology to mental health. Technology is ubiquitous in the day to day lives of young people in Canada but little is known about the ways in which digital media affects their mental health, especially for Indigenous youth. Research seldom engages youth to clarify and or interrogate digital media and well-being. This paper addresses the dearth of empirical work and supports the development of...
Source: https://tandf.figshare.com/articles/dataset/_i_Keyboard_warriors_i_Visualising_technology_and_well-being_i_with_for_i_and_i_by_i_indigenous_youth_through_digital_stories/11106794/1
The Dataset Collection
by Martin Dorber; Koen Kuipers; Francesca Verones
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LUCM map generated in "Dorber, M.; Kuipers, K.; Verones, F., Global characterization factors for terrestrial biodiversity impacts of future land inundation in Life Cycle Assessment. Science of The Total Environment 2019. (https://doi.org/10.1016/j.scitotenv.2019.134582)" to calculate Area (Ai,j) and area shares (pi,j). Values for land use types: 1= Natural habitat; 2= Managed forest; 3 Pasture; 4 Agriculture; 5= Urban; 210 = Water
Source: https://figshare.com/articles/dataset/LUCM_Map_Ratser_File/11106575/1
The Dataset Collection
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Lacertidae phylotranscriptomic alignments: misgen_10 Lacertidae morphological matrix for phylogenetic analysis: lacertidae_morph_matrix_20_02_reduced.nex Complete concatenated matrix: lacertidae_v7 files, containing: - A zipped file with the entire, concatenated alignment in Fasta format - a text file with partition information. 12S, 16S, cytb, nd4, cmos are the genes traditionally used in lacertid phylogenetics; L1-L346 are the anchored derived from anchored phylogenomics; the remaining loci...
Source: https://figshare.com/articles/dataset/Lacertidae_phylogenomic_alignments_and_morphological_matrix/8150690/1
The Dataset Collection
by Jiapeng Qu; Fabian Ewald fassnacht; Christopher Schiller; Teja Kattenborn; Xinquan Zhao
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Landsat NDVI difference 1990 2002 Tile 7
Source: https://springernature.figshare.com/articles/dataset/Landsat_NDVI_difference_1990_2002_Tile_7/7767659/1