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Feb 19, 2019 Crossref
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Metadata from the Crossref DOI registrar about "titles" (aka, individual Journals), in CSV format. Originally fetched from: https://wwwold.crossref.org/titlelist/titleFile.csv
( 1 reviews )
Screen capture of the research about the public availability of medical literature concerning the corona virus and its medication. CC0 Waiver
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/IZ3VAU&version=1.0
The Dataset Collection
- Ruben Props
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Refinement of supervised Vizbin binning strategy to reconstruct metagenome assembled genomes (MAGs).
Source: https://figshare.com/articles/dataset/Anvio_database/6170420/1
The Dataset Collection
- Kresten Lindorff-Larsen
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Trajectories of ww domainTrajectories dataTrajectories of WW domain
Source: https://figshare.com/articles/dataset/GTT-1-protein-275_dcdWW_domain_trajectories/12163527/2
The Dataset Collection
- Manuel de Pedro; Miquel Riba; Santiago González-Martínez; Pedro Seoane; Rocío Bautista; M. Gonzalo Claros; Maria Mayol
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This VCF file includes the filtered SNP dataset for 238 Leontodon longirostris samples and 20 for the outgroup sister species Leontodon saxatilis (168,733 SNPs).
Source: https://figshare.com/articles/dataset/Leontodon_vcf/12903848/2
The Dataset Collection
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Zn-atz-oba gas sorption data
Source: https://figshare.com/articles/dataset/Zn-atz-oba_gas_sorption_data_Exp_Sim_xlsx/16571151/2
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=b_ZZTsU4kUA strain : CB4853 timestamp : 2011-03-17T15:17:49+00:00 gene : -N/A- chromosome : -N/A- allele : -N/A- strain_description : C. elegans Wild Isolate (Altadena, USA) sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri...
Source: https://zenodo.org/record/1023654
The Dataset Collection
- Martineau, Celine N.; Nollen, Ellen A. A.
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=qYtdVcAFUL8 strain : AQ2947 timestamp : 2014-04-10T10:17:57+02:00 strain_description : CGC N2 (Bristol, UK) sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away food : OP50 who : Celine N. Martineau,...
Source: https://zenodo.org/record/1200948
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=TgMjThQAJi0 strain : N2 timestamp : 2010-10-15T15:15:00+01:00 gene : -N/A- chromosome : -N/A- allele : -N/A- strain_description : Schafer Lab N2 (Bristol, UK) sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35...
Source: https://zenodo.org/record/1012905
The Dataset Collection
- Martineau, Celine N.; Nollen, Ellen A. A.
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=Z5d0z3g9sDA strain : AQ2947 timestamp : 2014-05-08T08:22:32+02:00 strain_description : CGC N2 (Bristol, UK) sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away food : OP50 who : Celine N. Martineau,...
Source: https://zenodo.org/record/1192651
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=WJfHXGfS53Y strain : CX2205 timestamp : 2011-02-08T11:17:00+00:00 gene : odr-3 chromosome : V allele : n2150 strain_description : odr-3(n2150)V sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away...
Source: https://zenodo.org/record/1030535
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=8NWNgKMifss strain : QL20 timestamp : 2012-10-31T10:42:34+00:00 gene : ins-38 chromosome : -N/A- allele : tm2632 strain_description : ins-38(tm2632) sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri size : 35 orientation :...
Source: https://zenodo.org/record/1007115
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=HLHE9w20YuM strain : AQ2056 timestamp : 2010-01-25T15:28:32+00:00 gene : npr-2 chromosome : IV allele : ok419 strain_description : npr-2(ok419)IV sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation :...
Source: https://zenodo.org/record/1026069
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=VSPOk4QsZx8 strain : AX1410 timestamp : 2010-01-19T10:45:47+00:00 gene : flp-18 chromosome : X allele : db99 strain_description : flp-18(db99)X sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away...
Source: https://zenodo.org/record/1025220
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=rdgfQlzVGZE strain : QL26 timestamp : 2012-11-09T16:39:03+00:00 gene : ins-9 chromosome : -N/A- allele : tm3618 strain_description : ins-9(tm3618) sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation :...
Source: https://zenodo.org/record/1006997
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=Q9F4mCfjQSU strain : RB2005 timestamp : 2015-02-13T15:40:00+00:00 gene : T28F2.7 chromosome : I allele : ok2657 strain_description : T28F2.7(ok2657)I sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri size : 35 orientation :...
Source: https://zenodo.org/record/1007251
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=TZQGJ0FJBBk strain : CB5 timestamp : 2010-09-10T11:45:20+01:00 gene : unc-7 chromosome : X allele : e5 strain_description : unc-7(e5)X sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away food : OP50...
Source: https://zenodo.org/record/1003840
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=YE031Y_p1v4 strain : CB5 timestamp : 2010-09-09T12:26:21+01:00 gene : unc-7 chromosome : X allele : e5 strain_description : unc-7(e5)X sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away food :...
Source: https://zenodo.org/record/1007811
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=svmUhfFEJHM strain : RB557 timestamp : 2015-02-06T13:11:03+00:00 gene : asic-2 chromosome : I allele : ok289 strain_description : asic-2(ok289)I sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away...
Source: https://zenodo.org/record/1006498
The Dataset Collection
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/2641306
The Dataset Collection
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Log and boot files of game 209
Source: https://zenodo.org/record/819293
Wbbyyr: FastText language models for Mandarin Chinese, trained on 14,440,000 Sina Weibo posts for each year in 2012-2018. The 14,440,000 posts from each year are split into 10 folds. Due to Zenodo size limit, this dataset contains only the first fold from each year. Each model is trained for 20 iterations. Each vector is 300 dimensions long.
Source: https://zenodo.org/record/3605209
The Dataset Collection
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3303264
The Dataset Collection
- Raphaël Nussbaumer; Lionel Benoit; Grégoire Mariethoz; Felix Liechti; Silke Bauer; Baptiste Schmid
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This dataset contains the interpolated values of bird density and bird flight speed (N-S and E-W) resulting from the methodology presented in [reference].The methodology is explained in less detail at  rafnuss-postdoc.github.io/BMM . The resulting interpolation is a probability distribution (define the probability of each value to occurs). Only the median, quantile 10 and 90 are given in this file.  The spatio-temporal grid has a resolution of 0.2° in latitude (43°-68°) and longitude...
Source: https://zenodo.org/record/3243466
The Dataset Collection
- figshare admin cellimagelibrary
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Single computed slice through a tomographic reconstruction of a protoplasmic astrocyte in a 0.5 um thick section from the hippocampus of a 1 month old male mouse, imaged with intermediate voltage electron microscopy. This reconstruction is the 14th in a series of 26 serial reconstructions through the cell soma. The complete reconstruction can be viewed under MP7503.
Source: https://cellimagelibrary.figshare.com/articles/dataset/CCDB_6727_jpg/8179529/1
Bulk Bibliographic Metadata
- DIrectory of Open Access Journals
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Downloaded from https://doaj.org/csv and the OAI-PMH interface.
The Dataset Collection
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This landsat scene is an example used in the sagebrush-ecosystem-modeling github workflow for NEON's Onaqui Mountains (ONAQ) site. Landsat-8 image courtesy of the U.S. Geological Survey
Source: https://figshare.com/articles/dataset/Landsat-L1-038_032-201710-ONAQ-scene/12525548/2
The Dataset Collection
- Soon-Chun Jeong; Myung-Shin Kim; Ji Hong Kim; Youn Young Hur
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Candidate SNP variants detected by analysis of genome resequencing data from 33 grape accessions
Source: https://figshare.com/articles/dataset/33Grapes_Total_SNP_final_chr06_vcf_gz/8116106/1
The Dataset Collection
- Ben Fulcher
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A diverse selection of 1000 empirical time series, along with results of an hctsa feature extraction, using v1.03 of hctsa and Matlab 2019b, computed on a linux server at Sydney University. The results of the computation are in the hctsa file, HCTSA_Empirical1000.mat for use in Matlab using v1.03 of hctsa . The same data is available in .csv format (e.g., for use with non-Matlab computing environments) for the hctsa_datamatrix.csv (results of feature computation), with information about rows...
Source: https://figshare.com/articles/dataset/1000_Empirical_Time_series/5436136/7
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for HG03452. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_HG03452/7901339/1
Bulk Bibliographic Metadata
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This item contains a snapshot of the "Norwegian Register for Scientific Journals, Series and Publishers", as downloaded from https://dbh.nsd.uib.no/publiseringskanaler/AlltidFerskListe. As the name indicates, this is a registry of international Journals (aka "titles", or "serials"); the scope is not limited to Norwegian or Nordic publications.
tar file with numerical Euler solution and processed data used in plotting the pressure fields
Source: https://rs.figshare.com/articles/dataset/Euler_solution_at_t_0_0031_from_A_fluid_mechanic_s_analysis_of_the_teacup_singularity/12739523/1
The Dataset Collection
- Yungang Xu
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The data and codes used to reproduce the Figures and Tables for Result section 4: ScIGANs enhances the inference of cellular trajectory.
Source: https://figshare.com/articles/dataset/Section_4_zip/11509800/1
The Dataset Collection
- Matt Giesler; SXS Collaboration
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Simulation of a black-hole binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3307421
The Dataset Collection
- Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=8BpYpTtnA6s strain : KU25 timestamp : 2010-04-23T11:58:55+01:00 gene : pmk-1 chromosome : IV allele : km25 strain_description : pmk-1(km25)IV sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away...
Source: https://zenodo.org/record/1012793
The Dataset Collection
- Martineau, Celine N.; Nollen, Ellen A. A.
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=IRcoeqEf3JQ strain : CB1112 timestamp : 2014-03-26T09:16:50+01:00 strain_description : cat-2(e1112)II sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away food : OP50 who : Celine N. Martineau,...
Source: https://zenodo.org/record/1191686
The Dataset Collection
- Annette Menzel; Tongli Wang; Andreas Hamann; Maurizio Marchi; Dante Castellanos-Acuña; Duncan Ray
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Gridded data at 1km resolution, HadGem2 AOGCM, RCP 8.5, 2050s projections, monthly variables Tmin01-12 Tmax01-12 Tave01-12 Prec01-12. Unzip the archive with 7-zip.org.
Source: https://springernature.figshare.com/articles/dataset/Grids_1km_HadGem2_AOGCM_RCP_8_5_2050s_Monthly/11827572/1
The Dataset Collection
- Stephens, Ian
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uv (visibility) continuum and spectral line data for Per-emb-15 CC0 Waiver
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/DZWOXZ&version=1.0
The Dataset Collection
- PowerTAC
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Log and boot files of game 436
Source: https://zenodo.org/record/3341279
The Dataset Collection
- Jiapeng Qu; Fabian Ewald fassnacht; Christopher Schiller; Teja Kattenborn; Xinquan Zhao
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Landsat based peak NDVI image Year 1997 Tile 14
Source: https://springernature.figshare.com/articles/dataset/Landsat_based_peak_NDVI_image_Year_1997_Tile_14/7769753/1
The Dataset Collection
- Jiapeng Qu; Fabian Ewald fassnacht; Christopher Schiller; Teja Kattenborn; Xinquan Zhao
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Landsat based peak NDVI image Year 2018 Tile 13
Source: https://springernature.figshare.com/articles/dataset/Landsat_based_peak_NDVI_image_Year_2018_Tile_13/7769732/1
Bulk Bibliographic Metadata
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A snapshot of the oaDOI DOI/URL database, including open access status for each paper. oaDOI is the API backing unpaywall; see oadoi.org for more details. This dataset is intended for NON-COMMERCIAL USE ONLY; contact oaDOI for details or commercial support.
Standard paper bibliographic metadata corpuses (eg, Crossref, Pubmed, Arxiv) transformed into simple tab-separated and JSON formats.
-Consumer demand for 3 dishes: Spaghetti Bolognese, meatballs with rice and peas, buns with sausage -Individually adapted choice based conjoint -Structure of data +1/3 raw data (wide data) +2/3 long data (formatted to long) +3/3 analysed_data (labelled and modelled data) +3/3 labelled data (=analysed data with label of each Variable in 2nd row) -We also provide the original survey: survey.pdf -and the coding in Stata 17: +1/3 how raw data was created +2/3 how data was transformed from wide to...
Source: https://data.goettingen-research-online.de/dataset.xhtml?persistentId=doi:10.25625/MZQGOO&version=1.0
The Dataset Collection
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Is there more violence in the middle? Over 100 studies have analyzed whether violent out- comes such as civil war, terrorism, and repression are more common in regimes that are neither full autocracies nor full democracies, yet findings are inconclusive. While this hypothesis is ultimately about functional form, existing work uses models in which a particular functional form is assumed. Existing work also uses arbitrary operationalizations of “the middle”. This paper aims to resolve the...
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/LNUYXZ&version=1.1
The Dataset Collection
- Trujillo, Milo
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This dataset includes video metadata and comment data from the video platform BitChute. We believe that this data set contains all videos uploaded between June 28th and December 3rd 2019, outside of two brief outages due to power shutdowns on October 23rd and November 18th. For each video upload recorded, we visited the video one week after its upload to record view counts and comments. Therefore, comments posted more than one week after the video upload date are not included in our dataset....
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/9QCDHZ&version=1.0
Huntington referred to a ‘clash of civilizations’ revealing itself in international terrorism, particularly in the clash between the Islamic civilization and the West. The authors confront his hypotheses with ones derived from the strategic logic of international terrorism. They predict more terrorism against nationals from countries whose governments support the government of the terrorists’ home country. Like Huntington, they also predict excessive terrorism on Western targets, not...
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/HOGQGD&version=1.0
Scholars, practitioners, and pundits often leave their assessments of uncertainty vague when debating foreign policy, arguing that clearer probability estimates would provide arbitrary detail instead of useful insight. We provide the first systematic test of this claim using a data set containing 888,328 geopolitical forecasts. We find that coarsening numeric probability assessments in a manner consistent with common qualitative expressions—including expressions currently recommended for use...
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/D9FAZL&version=1.0
The Dataset Collection
- Tobin, John
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ALMA 13CO Measurement sets CC0 Waiver
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/PIDQM1&version=1.0
This replication archive contains all data and code to replicate the results in "Measuring Political Positions from Legislative Speech" by Benjamin E. Lauderdale and Alexander Herzog. Article abstract : Existing approaches to measuring political disagreement from text data perform poorly except when applied to narrowly selected texts discussing the same issues and written in the same style. We demonstrate the first viable approach for estimating legislator-specific scores from the...
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/RQMIV3&version=1.0
The datum for a manuscript submitted to 《Geophysical Research Letters》. CC0 Waiver
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/TZM7CR&version=1.0
The Dataset Collection
- Zigler, Cory
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This file is of the same format of zip-code-level annual Medicare data used for the analysis, but all variables have been simulated to contain fake data. This data file can be used to reconstruct the analog to the analysis data set (but with fake Medicare data) CC0 Waiver
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/PR35NS&version=1.0
The Dataset Collection
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The MOOD project (MOnitoring Outbreak events for Disease surveillance in a data science context. H2020) has geo-referenced the data Google has published as a series of PDF files presenting reports on national and subnational human mobility levels relative to a baseline data of late January 2020. The details and the PDF files can be found at https://www.google.com/covid19/mobility/ . More detail on these files can be found at https://www.moodspatialdata.com/humanmobilityforcovid19 The first set...
Source: https://figshare.com/articles/dataset/Maps_of_human_mobility_change_during_the_COVID-19_outbreak/12130980/65
The Dataset Collection
- Benoit Pasquier
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See AIBECS.jl
Source: https://figshare.com/articles/dataset/OCIM2_KiLOW_He_bson/11911131/1
The Dataset Collection
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Raw fastq reads (contaminated with yeast) Sanger 16s .ab1 RAST 16s fasta RDP alignment Cleaned up alignment  FastTree phylogenetic tree FastTree rerooted phylogenetic tree  
Source: https://figshare.com/articles/dataset/From_Swab_to_Publication_Sample_Data_Tatumella_/1064368/1
The Dataset Collection
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Supporting data for ALLMAPS. The data set includes yellow cat fish de novo genomic scaffolds, a combination of four tGBS maps including two genders and two mapping software JOINMAP and R/QTL - JMFemale, JMMale, BCFemale, BCMale, respectively. ALLMAPS was run to produce pseudomolecules based on these input data. Weighting scheme for ALLMAPS was equal weights (weight=1) for each of the four input maps.   Command python -m jcvi.assembly.allmaps path JM-4.bed scaffolds.fasta   Changelog -...
Source: https://figshare.com/articles/dataset/ALLMAPS_supporting_data_Yellow_catfish_genome_assembly/1057746/2
NCSU_43360 Swedish Malaise trap project 18-Aug-2003 Sweden Smaland Almhults kommun Stenbrohult, Djaknabygds bokback, Heath with old beeches 56.60910034 14.19309998
Source: https://figshare.com/articles/dataset/Male_genitalia_of_Conostigmus_geniculatus_dorsal_view_PSUCIM_4336_/100988/2
The Dataset Collection
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Supplementary data for the metaseq manuscript. This dataset is intended to be downloaded and unpacked automatically, along with the rest of the supplemental data files, using the download-metaseq-supplemental.py script found at http://figshare.com/download/file/1577683 .
Source: https://figshare.com/articles/dataset/metaseq_supplemental_data_ChIP_seq_BAMs_BG3_Shep_/1092594/2
The Dataset Collection
- Mike R. James; Gilles Antoniazza
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James et al. (2020) - Mitigating systematic error in topographic models for geomorphic change detection: Accuracy, precision and considerations beyond off-nadir imagery UAV-collected image dataset and associated image coordinates of GCP observations for surveys of la Borgne d'Arolla. See paper for details. 60m_10degr_3 : UAV image data File formats for image observations: .xml file contains GCP image observations (and other data) exported from Photoscan v1.4.2. Can be imported back into...
Source: https://figshare.com/articles/dataset/James_et_al_2020_BdA_60m_10degr_3/11786754/1
The Dataset Collection
- Sisi Chen
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This file contains single-cell RNA-seq datasets associated with : Chen, S, et al. 2020. “Dissecting Heterogeneous Cell Populations across Drug and Disease Conditions with PopAlign.” bioRxiv . https://doi.org/10.1101/421354. ------------------------ DATASETS ------------------------ Each data folder includes: barcodes.tsv : cell barcodes genes.tsv : genes [ Name ].mtx : sparse matrix file of transcript counts Subfolders MM1-MM4: --------------- 22,294 Peripheral Blood Mononuclear Cells...
Source: https://figshare.com/articles/dataset/PopAlign_Data/11837097/3
The Dataset Collection
- Maria Izabel Cavassim; Sara Moeskjaer; Bryden Fields; Asger Bachmann; Bjarni Vilhjálmsson; Mikkel H Schierup; J. Peter W. Young; Stig Uggerhøj Andersen
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Supplementary material (Tables and Figures) for the article: Cavassim et al. 2020: Symbiosis genes show a unique pattern of introgression and selection within a Rhizobium leguminosarum species complex. Data.zip: comprises gene alignments and SNP matrices of a Rhizobium complex. Further detailed is found in the article https://doi.org/10.1099/mgen.0.000351
Source: https://figshare.com/articles/dataset/Gene_alignments_and_SNP_matrices_of_a_Rhizobium_complex/11568894/5
The complete mitochondrial genome of Aesop slipper lobster Scyllarides haanii (De Haan, 1841) sequencing cleandata
Source: https://figshare.com/articles/dataset/The_complete_mitochondrial_genome_of_Aesop_slipper_lobster_Scyllarides_haanii_De_Haan_1841_sequencing_cleandata/12805703/1
100-dimensional word2vec CBOW negative sampling word embeddings for the Cyrillic Uzbek language. Trained using the webcrawl corpus v1.
Source: https://figshare.com/articles/dataset/uzb-cyrl-webcrawl-v1-word2vec-cbow-ns-100d/12991472/2
The Dataset Collection
- Li Gao
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Gene matrix for CESC
Source: https://figshare.com/articles/dataset/Gene_matrix_for_CESC/12751418/1
The Dataset Collection
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Expression of prohormone convertase 1/3 (RNA) in the larval brain of Tribolium. Neuropile stained with against synapsin, nuclear stain.
Source: https://figshare.com/articles/dataset/PC13_expression_in_the_Tribolium_larval_brain/13072415/1
The Dataset Collection
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Reconstructions of the Large Ensemble Testbed generated by NN, XGB, and RF algorithms.
Source: https://figshare.com/articles/dataset/pCO2_reconstructions_-_Large_Ensemble_Testbed_-_XG_-_GFDL/12925631/1
The Dataset Collection
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This is the second part of a data set from September 2004 of low temperature STM data.
Source: https://figshare.com/articles/dataset/Part_2_of_LTSTM_data_set_from_Sept_2004/1284306/1
The Dataset Collection
- Eric Capo; Alexandra Rouillard; Charline Giguet-Covex; Kevin Nota; Aurèle Vuillemin; Peter Heintzman; Marco J. L. Coolen; Laura Saskia Epp; Isabelle Domaizon; Inger Greve Alsos; Laura Parducci
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This folder is used to compile the raw data used in each of the case study included in this manuscript
Source: https://figshare.com/articles/dataset/Data_from_manuscript_Lake_sedimentary_DNA_research_on_past_terrestrial_and_aquatic_biodiversity_Overview_and_recommendations_/13007279/2
The Dataset Collection
- Kresten Lindorff-Larsen
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Trajectories of ww domainTrajectories dataTrajectories of WW domain
Source: https://figshare.com/articles/dataset/GTT-1-protein-211_dcdWW_domain_trajectories/12163065/2
The Dataset Collection
- Paolo Mignone
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Fold 7 test set
Source: https://figshare.com/articles/dataset/test7_zip/13372976/1
Mass cytometry data of BM and HSPC cells.
Source: https://figshare.com/articles/dataset/Original_fcs_files_of_mass_cytometry/16528836/2
The Dataset Collection
- Aldo Hernandez-Corchado
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bigwigs
Source: https://figshare.com/articles/dataset/2-1_bw/13526330/1
Molecular phylogenetic inference is inherently dependent on choices in both methodology and data. Many insightful studies have shown how choices in methodology, such as the model of sequence evolution or optimality criterion used, can strongly influence inference. In contrast, much less is known about the impact of choices in the properties of the data, typically genes, on phylogenetic inference. We investigated the relationships between 52 gene properties (24 sequence-based, 19 function-based,...
Source: https://figshare.com/articles/dataset/A_genome-scale_investigation_of_how_sequence-_function-_and_tree-based_gene_properties_influence_phylogenetic_inference/1597710/2
The Dataset Collection
- Lindsey Olsen
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agrypnia genome assembly submitted to NCBI. Contamination was filtered out using blob tools
Source: https://figshare.com/articles/dataset/agrypnia_filtered_fasta/13383092/1
The Dataset Collection
- Bjorn Herrmann
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sub-18
Source: https://figshare.com/articles/dataset/sub-18_rar/16564113/1
The Dataset Collection
- Xiaomei Shu; David P. Livingston III; Charles P. Woloshuk; Gary A. Payne
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Developing maize seeds were inoculated with Aspergillus flavus and collected at 4 hours post inoculation
Source: https://figshare.com/articles/dataset/Af_4hpi_rep1/5603281/1
The Dataset Collection
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Raw (joined, paired-end Illumina MiSeq) 16S sequences for data in:  Graham EB, Crump AR, Resch CT, Fansler S, Arntzen E, Kennedy DW, Fredrickson JK and Stegen JC (2016). Coupling spatiotemporal community assembly processes to changes in microbial metabolism.  Front. Microbiol.   7 :1949. doi: 10.3389/fmicb.2016.01949 Graham, E. B., A. R. Crump, C. T. Resch, S. Fansler, E. Arntzen, D. W. Kennedy, J. K. Fredrickson, and J. C. Stegen. Deterministic influences exceed dispersal effects on...
Source: https://figshare.com/articles/dataset/Graham_et_al_2016_Frontiers/4264148/2
The Dataset Collection
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DNS data in forced turbulence for case 1-part a
Source: https://figshare.com/articles/dataset/entrainment3df_case1_tar_gzaa/5821086/1
The Dataset Collection
- Haiyang Hu
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Human brain tissues were obtained from the Wuhan brain bank in accordance with the brain bank protocol. Ethical agreements were obtained from the donors or their relatives by written informed consent. Total RNA was isolated from the frozen prefrontal cortex tissue using the Trizol (Invitrogen, USA) protocol with no modifications. Low molecular weight RNA was isolated, ligated to the adapters, amplified, and sequenced following the Small RNA preparation protocol (Illumina, USA) with no...
Source: https://figshare.com/articles/dataset/human_brain_smRNA_seq_bz2/6893138/1
The Dataset Collection
- Axel Séguret
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Each directory stores 12 trials with the number of zebrafish displayed in the name of the directory (1 AB is for 12 trials of 1 zebrafish AB) for the directory 20AB, the data show only the positions of the individuals without their identities. The first column is for the time, then columns go by two (for x position then y position) For the directories 2AB, 3AB, 5AB, 7AB and 10AB, the data are ranked to gap and no gap. Gap means there are nan in the files when the tracker can not identify the...
Source: https://figshare.com/articles/dataset/seguret_dryad_2017_rar/5151247/1
The Dataset Collection
- Emerson M. A. Xavier; Francisco J. Ariza-López; Manuel A. Ureña-Cámara
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This file is part of the MatchingLand testbed and contains the datasets of systematic disturbance group (only point data). The systematic disturbance group is formed by synthetic datasets generated from a set of affine transformations over the initial datasets. The datasets are in Shapefile format and coordinate reference system EPSG:32628.
Source: https://springernature.figshare.com/articles/dataset/MatchingLand_-_systematic_disturbance_point_data/4658770/1
The Dataset Collection
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This file contains simulated benchmark WGBS data for 3 samples in two conditions saved as an `.rds` file for analysis with R, which contains a bsseq object as well as a Granges object denoting the true DMRs. This benchmark data was created to mimic the properties of real WGBS data in order to evaluate the method dmrseq (described in the preprint at https://doi.org/10.1101/183210). This was done by splitting a set of biological replicates (controls) into two artificial groups and adding...
Source: https://figshare.com/articles/dataset/R_object_with_Benchmark_WGBS_data_3_samples_per_condition_/5695471/1
The Dataset Collection
- Alexander V. Georgiev; Diana Christie; Kevin A. Rosenfield; Angelina V. Ruiz-Lambides; Elizabeth Maldonado; Melissa Emery Thompson; Dario Maestripieri
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Explaining intraspecific variation in reproductive tactics hinges on measuring associated costs and benefits. Yet, this is difficult if alternative (purportedly less optimal) tactics remain unobserved. We describe a rare alpha-position take-over by an immigrant male rhesus macaque in a population where males typically gain rank via succession. Unusually, male aggressiveness after the take-over correlated with rank and mating success. The new alpha achieved the highest mating and reproductive...
Source: https://brill.figshare.com/articles/dataset/Movie_file_for_Breaking_the_succession_rule_the_costs_and_benefits_of_an_alpha_status_take_over_by_an_immigrant_rhesus_macaque_on_Cayo_Santiago/2198989/1
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for HG03812. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_HG03812/7928066/1
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for HG01624. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_HG01624/7895774/1
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for NA18864. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_NA18864/7890737/1
The Dataset Collection
- Andrew D. Richardson; David Y. Hollinger; Julie Shoemaker; Holly Hughes; Kathleen Savage; Eric A. Davidson
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Carbon dioxide (CO 2 ), methane (CH 4 ), and nitrous oxide (N 2 O) are the greenhouse gases largely responsible for anthropogenic climate change. Natural plant and microbial metabolic processes play a major role in the global atmospheric budget of each. We have been studying ecosystem-atmosphere trace gas exchange at a sub-boreal forest in the northeastern United States for over two decades. Historically our emphasis was on turbulent fluxes of CO 2 and water vapor. In 2012 we embarked on an...
Source: https://figshare.com/articles/dataset/Tower-_and_chamber-based_greenhouse_gas_flux_measurements_from_Howland_Forest_Maine_2012-2018_/7445657/1
The Dataset Collection
- Carson Witte
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MODIS sst 15-year timeseries in greater Kotzebue sound
Source: https://figshare.com/articles/dataset/sst_modis_day_nc/7423247/1
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for HG02286. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_HG02286/7928966/1
The Dataset Collection
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Data for Figure 2, Elsden & Wright, 2018b
Source: https://figshare.com/articles/dataset/Data_for_Figure_2_Elsden_Wright_2018/7235153/2
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for NA19475. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_NA19475/7929941/1
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for HG03874. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_HG03874/7928795/1
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for NA19185. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_NA19185/7927103/1
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for HG01950. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_HG01950/7911317/1
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for HG00097.
Source: https://figshare.com/articles/dataset/gVCF_HG00097/7841411/1
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for HG03558. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_HG03558/7907651/1
The Dataset Collection
- Musfiqur Rahman
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English - code parallel corpus from StackOverflow
Source: https://figshare.com/articles/dataset/SOParallelData_zip/7673927/1
The Dataset Collection
- Jonathan Pevsner
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1000 Genomes gVCF mapped to hs37d5 for NA18504. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
Source: https://figshare.com/articles/dataset/gVCF_NA18504/7944293/1
The Dataset Collection
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XAW
Source: https://figshare.com/articles/dataset/Cannabis_Microbiome_Raw_Sequence_Data_xaw/928621/1
The Dataset Collection
- Hacking Materials
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Matbench v0.1 test dataset for predicting DFT PBE band gap from structure. Adapted from Materials Project database. Removed entries having a formation energy (or energy above the convex hull) more than 150meV and those containing noble gases. Retrieved April 2, 2019.
Source: https://figshare.com/articles/dataset/mp_gap/9461444/1