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Academic Data and Datasets
Apr 5, 2022 Diren Beyoglu
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GCMS data 
Source: https://figshare.com/articles/dataset/GCMS_HepG2/1529824/1
Academic Data and Datasets
Apr 5, 2022 Stephens, Ian
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uv (visibility) continuum and spectral line data for Per-emb-7
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/A8XY2V&version=1.0
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=nC7ZCfRX77s strain : VC1340 timestamp : 2011-09-15T11:39:00+01:00 gene : C52B9.11 chromosome : X allele : gk596 strain_description : C52B9.11(gk596)X sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation...
Source: https://zenodo.org/record/1022173
C.elegans behavioural database
Apr 5, 2022 Martineau, Celine N.; Nollen, Ellen A. A.
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=_djVv6OPEso strain : OW939 timestamp : 2014-03-23T19:18:59+01:00 strain_description : zgIs113[P(dat-1)::alpha-Synuclein::YFP] sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away food : OP50 who :...
Source: https://zenodo.org/record/1192659
Academic Data and Datasets
Apr 5, 2022 Kasten, Megan; Opitz, Rachel
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Final 3D dataset for object 1989.21.2044.LL139 in the collections of York Archaeological Trust. 1989.21.2044.LL139 is a small campanulate bowl of Ebor Ware 1 (Monaghan 1997, 875) Data was captured using a Zeiss Comet L3D 2 5M at 100 FOV to enable the analysis of use-wear on archaeological objects. The model is scaled in millimetres. Final dataset consists of 5,722,904 triangles - additional metadata included in associated spreadsheet.
Source: https://zenodo.org/record/3861998
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=jX8lt_hVN2A strain : AQ1031 timestamp : 2010-09-30T12:28:20+01:00 gene : mec-12 chromosome : III allele : e1605 strain_description : mec-12(e1605)III; bzIs17[pmec-4::YC2.12; lin-15(+)] sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena :...
Source: https://zenodo.org/record/1023874
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=8HO_P6Ljajg strain : CB566 timestamp : 2010-09-17T12:37:53+01:00 gene : unc-34 chromosome : V allele : e566 strain_description : unc-34(e566)V sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away...
Source: https://zenodo.org/record/1017266
Academic Data and Datasets
Apr 5, 2022 Ali Safaya
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trwiki-67 dataset trwiki-67 is a language modeling dataset that contain 67 million words of raw wikipedia articles. It can be utilized as a benchmark for different language modeling tasks on character, subword, or word level. This dataset was extracted from a Turkish wikipedia dump on 20 July 2021. Preprocessing All lists and tables were removed from the articles, and the initial extraction from .xml dump was done using wikiextractor : Additionally, further preprocessing was applied to get rid...
Source: https://zenodo.org/record/5146001
Academic Data and Datasets
Apr 5, 2022 Foucart, Francois; Williamson, Andrew; Kidder, Larry; Haas, Roland; Hinderer, Tanja; Hemberger, Dan; Duez, Matthew; Scheel, Mark; Pfeiffer, Harald; Buonanno, Alessandra; Boyle, Michael
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Simulation of a black-hole neutron-star binary system evolved by the SpEC code .
Source: https://zenodo.org/record/3337268
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=wRa_0BMNsfE strain : RB1316 timestamp : 2010-06-15T12:08:36+01:00 gene : unc-105 chromosome : II allele : ok1432 strain_description : unc-105(ok1432)II sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35...
Source: https://zenodo.org/record/1027630
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=NO-YIlm3GPc strain : RB668 timestamp : 2011-09-15T14:03:34+01:00 gene : ftn-2 chromosome : I allele : ok404 strain_description : ftn-2(ok404)I sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away food...
Source: https://zenodo.org/record/1020737
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=5u27Z7dIV5M strain : N2 timestamp : 2010-07-08T10:26:40+01:00 gene : -N/A- chromosome : -N/A- allele : -N/A- strain_description : Schafer Lab N2 (Bristol, UK) sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri size : 35...
Source: https://zenodo.org/record/1025457
Academic Data and Datasets
Apr 5, 2022 Xu,Huiyan
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The data are for the manuscript submitted to Journal of Geophysical Research-Atmospheres on 15th, August, 2019 by Huiyan Xu. 
Source: https://zenodo.org/record/4059012
Academic Data and Datasets
Apr 5, 2022 PowerTAC
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Log and boot files of game 335
Source: https://zenodo.org/record/3341001
Academic Data and Datasets
Apr 5, 2022 PowerTAC
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Log and boot files of game 436
Source: https://zenodo.org/record/3341279
Academic Data and Datasets
Apr 5, 2022 PowerTAC
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Log and boot files of game 50
Source: https://zenodo.org/record/3339584
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=8BpYpTtnA6s strain : KU25 timestamp : 2010-04-23T11:58:55+01:00 gene : pmk-1 chromosome : IV allele : km25 strain_description : pmk-1(km25)IV sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away...
Source: https://zenodo.org/record/1012793
Academic Data and Datasets
Apr 5, 2022 Kennelly, Patrick J.; Patterson, Tom; Jenny, Bernhard; Huffman, Daniel P.; Marston, Brooke E.; Bell, Sarah; Tait, Alexander M.
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An elevation model of Great Sand Dunes, Colorado, USA Landform features: active dune field, sand sheet, sabkha Resolution: 3.3 meter, 5,300 x 5,300 height samples File format: GeoTIFF This is one model of a set of elevation models: https://doi.org/10.5281/zenodo.3938020 . Please cite the entire set of models. When using this elevation model in an academic publication, please cite the following article, which describes the process and rationale for compiling elevation models: Kennelly, P. J.,...
Source: https://zenodo.org/record/3940434
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=E2_4xKDrA3c strain : VC1295 timestamp : 2011-09-13T15:42:56+01:00 gene : egg-5 chromosome : I allele : ok1781 strain_description : egg-5(ok1781)I sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away...
Source: https://zenodo.org/record/1023026
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=TgMjThQAJi0 strain : N2 timestamp : 2010-10-15T15:15:00+01:00 gene : -N/A- chromosome : -N/A- allele : -N/A- strain_description : Schafer Lab N2 (Bristol, UK) sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35...
Source: https://zenodo.org/record/1012905
Academic Data and Datasets
Apr 5, 2022 Mayes, WM; Perks, MT; Large, ARG; Davis, JE; Gandy, CJ; Orme, PAH; Jarvis, AP
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This dataset contains the files required to determine morphological change on the Coledale Beck in Cumbria (UK) immediately following Storm Desmond, which occurred in December 2015, and the continued morphological adjustment experienced through 2016. Specifically, this dataset consists of the following files: (i) a post-Storm Desmond terrestrial laser scan survey ( mainSlide_raster0.1.tif ); (ii) an outline of the major hillslope failure observed ( scarPoints.mat ); (iii) calculated...
Source: https://zenodo.org/record/3979280
C.elegans behavioural database
Apr 5, 2022 Martineau, Celine N.; Nollen, Ellen A. A.
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=IRcoeqEf3JQ strain : CB1112 timestamp : 2014-03-26T09:16:50+01:00 strain_description : cat-2(e1112)II sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away food : OP50 who : Celine N. Martineau,...
Source: https://zenodo.org/record/1191686
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=BDXGxnoR11M strain : RB1226 timestamp : 2010-02-24T12:04:14+00:00 gene : acr-18 chromosome : V allele : ok1285 strain_description : acr-18(ok1285)V sex : hermaphrodite stage : adult ventral_side : clockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away...
Source: https://zenodo.org/record/1014737
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=ALshGfOkM0Y strain : CB1598 timestamp : 2010-04-14T11:57:27+01:00 gene : unc-1 chromosome : X allele : e1598 strain_description : unc-1(e1598)X sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation : away...
Source: https://zenodo.org/record/1028473
Academic Data and Datasets
Apr 5, 2022 Raphael Neukom; Luis A. Barboza; Michael P. Erb; Feng Shi; Julien Emile-geay; Michael N. Evans; Jörg Franke; Darrell S. Kaufman; Lucie Lücke; Kira Rehfeld; Andrew Schurer; Feng Zhu; Stefan Brönnimann; Gregory J. Hakim; Benjamin J. Henley; Fredrik Charpentier Ljungqvist; Nicholas Mckay; Veronika Valler; Lucien von Gunten
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Input data for the reconstructions and required datasets and code to generate the figures in the paper. Proxy data used for the reconstructions: proxy_ama_2.0.0_PAGES-crit-regional+FDR.txt: PAGES2k v2.0.0 proxy records, R-FDR screened subset (See PAGES2k Consortium, 2017, Scientific Data, doi: 10.1038/sdata.2017.88). Data are tab separated, the first column is the "paleoData_TSid" to identify each record in the metadata file. First row is year CE....
Source: https://figshare.com/articles/dataset/input_data_zip/8137715/3
C.elegans behavioural database
Apr 5, 2022 Javer, Avelino; Currie, Michael; Hokanson, Jim; Lee, Chee Wai; Li, Kezhi; Yemini, Eviatar; Grundy, Laura J; Li, Chris; Ch'ng, Quee-Lim; Schafer, William R; Kerr, Rex; Brown, André EX
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This experiment is part of the  C.elegans behavioural database . For more information and the complete collection of experiments visit http://movement.openworm.org preview link : https://www.youtube.com/watch?v=pbXXSsFVNYo strain : QL22 timestamp : 2012-10-31T11:23:27+00:00 gene : ins-10 chromosome : -N/A- allele : tm3498 strain_description : ins-10(tm3498) sex : hermaphrodite stage : adult ventral_side : anticlockwise media : NGM agar low peptone arena : style : petri size : 35 orientation :...
Source: https://zenodo.org/record/1007101
Academic Data and Datasets
Apr 5, 2022 Pirro, S
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.
Source: https://zenodo.org/record/4773888
Academic Data and Datasets
Feb 23, 2022 Daniel Leventhal; Alexandra Bova
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Rat 0229, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
Source: https://figshare.com/articles/dataset/R0229_20181102a_videos/13010276/1
Academic Data and Datasets
Feb 23, 2022 Daniel Leventhal; Alexandra Bova
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Rat 0309, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
Source: https://figshare.com/articles/dataset/R0309_20191119a_videos/13110581/1
Academic Data and Datasets
Feb 23, 2022 Nebojsa Malesevic; Alexander Olsson; Paulina Sager; Elin Andersson; Christian Cipriani; Marco Controzzi; Anders Björkman; Christian Antfolk
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Subject 13 signals
Source: https://springernature.figshare.com/articles/dataset/Subject_13/12807998/1
Academic Data and Datasets
Feb 23, 2022 Tobin, John
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H2CO Measurement sets from VANDAM Perseus Survey CC0 Waiver
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/BPTQHH&version=2.0
Academic Data and Datasets
Feb 23, 2022 Vera Terblanche
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Expression of prohormone convertase 1/3 (RNA) in the larval brain of Tribolium. Neuropile stained with against synapsin, nuclear stain.
Source: https://figshare.com/articles/dataset/PC13_expression_in_the_Tribolium_larval_brain/13072415/1
Academic Data and Datasets
Feb 23, 2022 A. Murat Eren; Florian Trigodet; Karen Lolans
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Assembled Illumina short reads from human oral cavity samples processed using the state-of-the-art DNA extraction strategies for shotgun metagenomics described in the following study: https://doi.org/10.1101/2021.03.03.433801 These two metagenomes are from the same individual's oral samples and generated from (1) the sample used for long-read sequencing of the same material to test HMW DNA extraction method 01 in our study (here named ORAL_ILLUMINA_METHOD_01_REPL_02_ASSEMBLED) and (2) the...
Source: https://figshare.com/articles/dataset/Assembled_Illumina_Short_Reads/14141819/1
Academic Data and Datasets
Feb 23, 2022 Kristen Naegle
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This is the expanded set of all predictions for GPS, run on the entire reference proteome, including sites not known to be phosphorylated. This dataset is used to perform a fast update when new phosphosites are discovered. The uncompressed folder will yield a large CSV file with predictions in list format (i.e. one line per kinase-substrate prediction) Columns in this order: substrate_id - unique substrate (accession_site) ID substrate_acc - Uniprot accession of substrate protein substrate_name...
Source: https://figshare.com/articles/dataset/Whole_proteome-level_GPS_predictions_part_2_/13228379/1
Academic Data and Datasets
Feb 23, 2022 Peter Vogt; Kurt H. Riitters; Giovanni Caudullo; Bernd Eckhardt
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This document summarizes the design process, definitions, and algorithmic implementation conducted by the Joint Research Centre to support the development and implementation of FAO’s global forest analysis for the thematic topics Accounting and Fragmentation. The analysis scheme and data products were designed to support the indicator Forest Fragmentation in the State of the World's Forests (SOFO) report 2020. The spatial forest coverage is derived from the Copernicus Global Land Cover 2015...
Source: https://figshare.com/articles/dataset/FAO_gez19_zip/11113325/1
Academic Data and Datasets
Feb 23, 2022 William Wint; Neil Alexander
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The MOOD project (MOnitoring Outbreak events for Disease surveillance in a data science context. H2020) has geo-referenced the data Google has published as a series of PDF files presenting reports on national and subnational human mobility levels relative to a baseline data of late January 2020. The details and the PDF files can be found at https://www.google.com/covid19/mobility/ . More detail on these files can be found at https://www.moodspatialdata.com/humanmobilityforcovid19 The first set...
Source: https://figshare.com/articles/dataset/Maps_of_human_mobility_change_during_the_COVID-19_outbreak/12130980/70
Academic Data and Datasets
Feb 23, 2022 Daniel Leventhal; Alexandra Bova
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deeplabcut output and processed 3D reconstructions of data for rat 0184. "_direct" zip files contain .csv's from the direct view and .mat files with cropping regions "_right/left" zip files contain .csv's from the mirror view and .mat files with cropping regions "_processed" files contain 3D reconstructions and reach analyses
Source: https://figshare.com/articles/dataset/R0184-DLC_output/13204307/1
Academic Data and Datasets
Feb 23, 2022 Jinshi Jian; Ryan Stewart; Xuan Du
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Here, we compiled data from a set of soil health measurements collected across 41 countries around the world, named SoilHealthDB, which includes 5,241 data entries from 281 published studies. The SoilHealthDB includes 42 soil health indicators and 45 background indicators that describe factors such as climate, elevation, and soil type. A primary goal of SoilHealthDB is to enable the research community to perform comprehensive analyses, e.g., meta-analyses, of soil health changes related to...
Source: https://figshare.com/articles/dataset/SoilHealthDB/8292176/8
Academic Data and Datasets
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This repository contains: 1. Starting peptide data, R scripts to process them, and the resulting quantitative protein data 2. R scripts to process the genetic data for the Collaborative Cross and Diversity Outbred mice for further analysis (e.g., QTL, mediation, heritability) 3. R scripts to run all analyses reported in manuscript 4. Results data 5. R scripts to reproduce all figures in manuscript
Source: https://figshare.com/articles/dataset/Collaborative_Cross_and_Diversity_Outbred_liver_proteomics_manuscript/12818717/1
Academic Data and Datasets
Feb 23, 2022 Dalberg
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The State of Aadhaar survey is the largest primary dataset collected on digital identity, globally. The dataset contains; 1. Household and member-level data collected for the in-depth and pulse survey 2. R codes used for analysis and visualisations 3. Additional spatial and meta data required for analysis and visuals The data, and all materials, are shared under Creative Commons Attribution 4.0 International license (CC-BY 4.0). You are free to: Share — copy and redistribute the material in...
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/M9RWZN&version=1.1
Academic Data and Datasets
Feb 23, 2022 Kaicun Wang; Can Wang; Wenjia Cai; Yidan Chen; Fang Guo; Jiachen Wang
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Population Grid for China under SSP5RCP6 from 2010 to 2100
Source: https://springernature.figshare.com/articles/dataset/Population_Grid_for_China_SSP5RCP6/11317643/1
Academic Data and Datasets
Feb 23, 2022 Daniel Leventhal; Alexandra Bova
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Rat 0225, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
Source: https://figshare.com/articles/dataset/R0225_20180528a_videos/12978344/1
Academic Data and Datasets
Feb 23, 2022 Joan Pulupa
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Karyopherin content at the nuclear periphery induces conformational changes in Nup54-mEGFP 494 but not Nup133-mEGFP.
Source: https://figshare.com/articles/dataset/Figure5F_Nup54_0_plusRan_plusKaps_t90/13339100/1
Academic Data and Datasets
Feb 23, 2022 Daniel Leventhal; Alexandra Bova
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Rat 0310, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
Source: https://figshare.com/articles/dataset/R0310_20191106a_videos/13110032/2
Academic Data and Datasets
Feb 23, 2022 Mike R. James; Gilles Antoniazza
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James et al. (2020) - Mitigating systematic error in topographic models for geomorphic change detection: Accuracy, precision and considerations beyond off-nadir imagery UAV-collected image dataset and associated image coordinates of GCP observations for surveys of la Borgne d'Arolla. See paper for details. 60m_10degr_1 : UAV image data File formats for image observations: .xml file contains GCP image observations (and other data) exported from Photoscan v1.4.2. Can be imported back into...
Source: https://figshare.com/articles/dataset/James_et_al_2020_BdA_60m_10degr_1/11786748/1
Academic Data and Datasets
Feb 20, 2022 Daniel Leventhal; Alexandra Bova
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Rat 0186, skilled reaching data collected on 8/24/2017 in Leventhal laboratory by Alexandra Bova
Source: https://figshare.com/articles/dataset/R0186_20170824a_videos/12845378/1
Academic Data and Datasets
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Model weights / tensorflow checkpoints for Max F. Burg et al. (2021): Learning Divisive Normalization in Primary Visual Cortex CC0 Waiver
Source: https://data.goettingen-research-online.de/dataset.xhtml?persistentId=doi:10.25625/0JCXYO&version=2.0
Academic Data and Datasets
Feb 20, 2022 Susheel Bhanu Busi
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The human gut microbiome produces a complex mixture of biomolecules which interact with human physiology and play essential roles in health and disease. Crosstalk between micro-organisms and host cells is favored by different direct contacts, but also by the export of molecules through secretion systems and extracellular vesicles. The resulting molecular network, comprised of various biomolecular moieties, has so far eluded systematic study. Here we present a methodological framework, optimized...
Source: https://figshare.com/articles/dataset/TableS10/16940353/1
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Feb 20, 2022 Tobin, John
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ALMA molecular line maps of BHR71 CC0 Waiver
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/SF50BJ&version=1.0
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Feb 20, 2022 Anonymous
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Open-source apps from F-droid used for the evaluation of the tool TNBDroid. We only use the apps for research. Commercial apps from google play used for the evaluation of the tool TNBDroid. We only use the apps for research.
Source: https://figshare.com/articles/dataset/socialApps/11932743/5
Replication material for: Pelz, Setu and Johannes Urpelainen. "Measuring and explaining household access to electrical energy services: Evidence from rural northern India" Energy Policy. The survey data come from the ACCESS dataset: Aklin, Michaël, Chao-yo Cheng, Johannes Urpelainen, Karthik Ganesan, and Abhishek Jain. 2016. "Factors affecting household satisfaction with electricity supply in rural India" Nature Energy 1: 16170. and: Mani, Sunil; Shahidi, Tauseef; Patnaik,...
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/JXP0YF&version=2.0
Academic Data and Datasets
Feb 20, 2022 David E. Shaw; John Klepeis; Alexander G. Donchev; Andrew G. Taube; Elizabeth Decolvenaere; Cory Hargus; Robert T. McGibbon; Ka-Hei Law; Brent A. Gregersen; Je-Luen Li; Kim Palmo; Karthik Siva; Michael Bergdorf
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Full dataset, containing interaction energies calculated using CCSD(T), MP2, HF, and SAPT0, as well as dimer geometries.
Source: https://springernature.figshare.com/articles/dataset/Donchev_et_al_DES370K/12692714/1
Academic Data and Datasets
Feb 20, 2022 otto kässi; Charlie Hadley; Vili Lehdonvirta
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Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
Source: https://figshare.com/articles/dataset/Online_Labour_Index_Measuring_the_Online_Gig_Economy_for_Policy_and_Research/3761562/1977
Academic Data and Datasets
Feb 20, 2022 Arrian Gibson-Khademi
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scATAC-seq dataset processed for inclusion in scATAC.Explorer R package. scATAC.Explorer is an R package containing a curated collection of publicly available scATAC-seq datasets that can easily be searched and retrieved within R. Included datasets are processed into a consistent format for ease of analysis. This dataset was not generated by our lab. Please also give credit to the source the dataset was retrieved from, included in reference field.
Source: https://figshare.com/articles/dataset/FreshMouseBrainCellRanger1_2_0/14357105/1
Academic Data and Datasets
Feb 20, 2022 Annette Menzel; Tongli Wang; Andreas Hamann; Maurizio Marchi; Dante Castellanos-Acuña; Duncan Ray
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Gridded data at 1km resolution, MPI AOGCM, RCP 4.5, 2050s projections, bioclimatic variables. Unzip the archive with 7-zip.org.
Source: https://springernature.figshare.com/articles/dataset/Grids_1km_MPI_AOGCM_RCP_4_5_2050s_Bioclim/11827674/1
Academic Data and Datasets
Feb 20, 2022 Soeren Lukassen; Robert Lorenz Chua; Timo Trefzer; Nicolas C. Kahn; Marc A. Schneider; Thomas Muley; Hauke Winter; Michael Meister; Carmen Veith; Agnes W. Boots; Bianca P. Hennig; Michael Kreuter; Christian Conrad; Roland Eils
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This dataset contains count matrices and per-cells metadata tables for RNA sequencing of 39778 single nuclei from healthy primary lung samples of 12 lung adenocarcinoma patients as well as 17451 single human bronchiole epithelial cells from 4 donors. All samples were processed using the 10X Genomics Chromium platform with v2 chemistry and sequenced with one sample per lane on an Illumina HiSeq4000. Reads were aligned to the hg19 reference genome version 1.2.0 obtained from 10X Genomics. Data...
Source: https://figshare.com/articles/dataset/Single-cell_RNA-Seq_of_human_primary_lung_and_bronchial_epithelium_cells/11981034/2
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Feb 20, 2022 Joel Sharbrough; Justin L. Conover; Corrinne Grover; Matheus Fernandes Gyorfy; Emma R. Miller; Jonathan F. Wendel; Daniel Sloan
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Whole-genome duplications (WGDs), in which the number of nuclear genome copies is elevated as a result of autopolyploidy or allopolyploidy, are a prominent process of diversification in eukaryotes. The genetic and evolutionary forces that WGD imposes upon cytoplasmic genomes are not well understood, despite the central role that cytonuclear interactions play in eukaryotic function and fitness. Cellular respiration and photosynthesis depend upon successful interaction between the 3000+...
Source: https://figshare.com/articles/dataset/Global_patterns_of_subgenome_evolution_in_organelle-targeted_genes_of_six_allotetraploid_angiosperms/13473207/1
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Feb 19, 2022 Benoit Pasquier
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See AIBECS.jl
Source: https://figshare.com/articles/dataset/OCIM2_KiHIGH_He_bson/11911125/2
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Feb 19, 2022 Kitt Paraiso
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BigWig and NarrowPeak/BroadPeak files from H3K27ac ChIP-seq and ATAC-seq datasets from the craniofacial regions of the human and mouse embryos.
Source: https://figshare.com/articles/dataset/Mammalian_Craniofacial_Epigenetics/15085245/5
Academic Data and Datasets
Feb 19, 2022 Annette Menzel; Tongli Wang; Andreas Hamann; Maurizio Marchi; Dante Castellanos-Acuña; Duncan Ray
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Gridded data at 1km resolution, HadGem2 AOGCM, RCP 8.5, 2050s projections, monthly variables Tmin01-12 Tmax01-12 Tave01-12 Prec01-12. Unzip the archive with 7-zip.org.
Source: https://springernature.figshare.com/articles/dataset/Grids_1km_HadGem2_AOGCM_RCP_8_5_2050s_Monthly/11827572/1
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Feb 19, 2022 Remote Sensing Group
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IND_Dataset_V2
Source: https://figshare.com/articles/dataset/IND_Dataset_V2/12311249/1
Academic Data and Datasets
Feb 19, 2022 Darcy Jones
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All supplementary material and full resolution figures for the Predector pipeline manuscript. Figure 1: UpSet plot showing predictions of signal peptides, transmembrane domains, and effector-like properties for all known effectors in the training dataset (N=125). Rows indicate sets of proteins predicted to have a property related to effector prediction (e.g. a signal peptide), with the horizontal bar chart indicating set size. Columns indicate where the horizontal sets intersect with each...
Source: https://figshare.com/articles/dataset/Predector_-_supplementary_material/13325213/1
Academic Data and Datasets
Feb 19, 2022 Eric Capo; Alexandra Rouillard; Charline Giguet-Covex; Kevin Nota; Aurèle Vuillemin; Peter Heintzman; Marco J. L. Coolen; Laura Saskia Epp; Isabelle Domaizon; Inger Greve Alsos; Laura Parducci
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This folder is used to compile the raw data used in each of the case study included in this manuscript
Source: https://figshare.com/articles/dataset/Data_from_manuscript_Lake_sedimentary_DNA_research_on_past_terrestrial_and_aquatic_biodiversity_Overview_and_recommendations_/13007279/2
An example of a sub-critical fracture development trigered by an acoustic wave.; An example of a DEM simulation of fracturing of a soft and flexible material under the tensional load.; A DEM simulation of fracturing of a strong and flexible material under the tensional load; The DEM simulation showing how a single “super-fiber” resistance to breaking apart a sample is built.; The perpendicular to tensional load view of temporal evolution (breaking) of inter-particle bonds (black dots) in...
Source: https://rs.figshare.com/articles/dataset/Trigered_sub-critical_fracturing_Fracturing_of_sof_and_flexible_material_Fracturing_of_strong_and_flexible_material_Super-fiber_resistance_to_breaking_DEM_and_Fiber_Bundle_model_similarity_from_Earthquake_physics_beyond_the_linear_fracture_/13627820/1
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Feb 19, 2022 Bjorn Herrmann
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sub-47
Source: https://figshare.com/articles/dataset/sub-47_rar/16566861/1
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Feb 19, 2022 Kresten Lindorff-Larsen
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Trajectories dataTrajectories of WW domain
Source: https://figshare.com/articles/dataset/GTT-1-protein-124_dcd/12162801/1
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Feb 19, 2022 Kresten Lindorff-Larsen
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Trajectories of ww domainTrajectories dataTrajectories of WW domain
Source: https://figshare.com/articles/dataset/GTT-1-protein-134_dcdWW_domain_trajectories/12162831/2
Academic Data and Datasets
Feb 19, 2022 Kresten Lindorff-Larsen
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Trajectories dataTrajectories of WW domain
Source: https://figshare.com/articles/dataset/GTT-1-protein-005_dcd/12162402/1
Academic Data and Datasets
Feb 19, 2022 Yongtao Lu; zhuoyue yang
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finite element model datasets for analysing the mechanical and permeability behavior of the TPMS scaffolds
Source: https://figshare.com/articles/dataset/Scaffold_mechanical_and_permeability_analysis/12721325/1
Academic Data and Datasets
Feb 19, 2022 Opale Coutant; Isabel Cantera; Kévin Cilleros; Tony Dejean; Alice Valentini; Jérôme Murienne; Sébastien Brosse
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Sequence reference database File containing the sequence reference database for Guianese freshwater fish species. BdR_Guyane.txt Run 1 Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file; 3) File with experiment name and the tags, the forward primer and the reverse primer sequence associated. Run 2 Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file; 3) File with experiment name and the tags, the forward primer and the reverse primer...
Source: https://figshare.com/articles/dataset/Detecting_fish_assemblages_with_environmental_DNA_does_protocol_matter_/13129703/1
Academic Data and Datasets
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Astec-Pm6 Live embryonic development of Phallusia mammillata (Phlebobranch ascidian). Cell membranes were fluorescently labeled by microinjection of mRNA encoding PH-citrine into unfertilized egg. The embryo has been live imaged with a MuVi-SPIM for three hours, from the 44-cell stage (Tp 1, St. 7) up to the late gastrula (Tp 88, St. 13), at 18°C. Whole cells were segmented using the ASTEC pipeline. Surface meshes were produced using the VTK library and MeshLab. The period between time points...
Source: https://figshare.com/articles/dataset/Astec-Pm6_Wild_type_Phallusia_mammillata_embryo_live_SPIM_imaging_stages_7-13_/8235470/1
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Feb 19, 2022 Thomas Cauchy
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435 032 nwchem logfiles calculated thanks to the quchempedia BOINC project. DFT calculations (B3LYP / 321G) The first 184 158 molecules corresond to the recalculation of QM9 and PC9. The others are newly generated molecules with the EvoMol software. Beware the concaneted tar file is 141GB of compressed files.
Source: https://figshare.com/articles/dataset/OD9_dataset_part_15_28/13102532/1
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Feb 19, 2022 Paolo Mignone
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Fold 7 test set
Source: https://figshare.com/articles/dataset/test7_zip/13372976/1
Academic Data and Datasets
Feb 19, 2022 Daniel Leventhal; Alexandra Bova
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Rat 0189, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
Source: https://figshare.com/articles/dataset/R0189_20171015a_videos/12899426/1
Academic Data and Datasets
Feb 19, 2022 Daniel Leventhal; Alexandra Bova
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Rat 0196, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
Source: https://figshare.com/articles/dataset/R0196_20171211a_videos/13173236/1
Academic Data and Datasets
Feb 19, 2022 Christian Moestl; Andreas Weiss; Rachel Bailey; Alexey Isavnin; David Stansby
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These are solar wind in situ data arrays in python pickle format suitable for machine learning, i.e. the arrays consist only of numbers, no strings and no datetime objects. See AAREADME_insitu_ML.txt for more explanation. If you use these data for peer reviewed scientific publications, please get in touch concerning usage and possible co-authorship by the authors (C. Möstl, A. J. Weiss, R. L. Bailey, A. Isavnin, D. Stansby): christian.moestl@oeaw.ac.at or twitter @chrisoutofspace Made with...
Source: https://figshare.com/articles/dataset/Solar_wind_in_situ_data_suitable_for_machine_learning_python_numpy_arrays_STEREO-A_B_Wind_Parker_Solar_Probe_Ulysses_Venus_Express_MESSENGER/12058065/5
Academic Data and Datasets
Feb 19, 2022 Joan Pulupa
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The Inner Ring Nups, Nup54 and Nup58, are reorganized with respect to the NPC after starvation.
Source: https://figshare.com/articles/dataset/Figure3_2D_Nup93_mEGFP_-6_starved/13338578/1
Academic Data and Datasets
Feb 19, 2022 Kresten Lindorff-Larsen
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Trajectories of ww domainTrajectories dataTrajectories of WW domain
Source: https://figshare.com/articles/dataset/GTT-1-protein-155_dcdWW_domain_trajectories/12162894/2
Academic Data and Datasets
Feb 19, 2022 Vitalij Novickij; Irute Girkontaite
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Raw data from experiments
Source: https://figshare.com/articles/dataset/Raw_dataset/13507140/1
Academic Data and Datasets
Feb 19, 2022 Daniel Leventhal; Alexandra Bova
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Rat 0219, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
Source: https://figshare.com/articles/dataset/R0219_20180306a_videos/13175141/1
Academic Data and Datasets
Feb 19, 2022 Daniel Leventhal; Alexandra Bova
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Rat 0169, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
Source: https://figshare.com/articles/dataset/R0169_20170524a_videos/13171463/1
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Feb 19, 2022 Trujillo, Milo
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This dataset includes video metadata and comment data from the video platform BitChute. We believe that this data set contains all videos uploaded between June 28th and December 3rd 2019, outside of two brief outages due to power shutdowns on October 23rd and November 18th. For each video upload recorded, we visited the video one week after its upload to record view counts and comments. Therefore, comments posted more than one week after the video upload date are not included in our dataset....
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/9QCDHZ&version=1.0
Academic Data and Datasets
Feb 19, 2022 John Wojahn
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This is the updated 2021 ReproChecklist
Source: https://figshare.com/articles/dataset/Updated_2021_ReproChecklist/15040293/1
Academic Data and Datasets
Feb 19, 2022 Paula Arielle Mendes Ribeiro Valdisser; Bárbara Salomão de Faria Müller; Janeo Eustáquio de Almeida Filho; Odilon Peixoto Morais Morais Júnior; Cléber Morais Guimarães; Tereza Cristina de Oliveira Borba; Isabela Pavanelli; Maria Imaculada Zucchi; Leandro G. Neves; Alexandre S.G. Coelho; Claudio Brondani; Rosana Pereira Vianello
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The phenotypic and genotypic raw data here deposited were used to conduct the analyses presented at the manuscript "Genome-wide association studies detect multiple QTLs for productivity in Mesoamerican diversity panel of common bean under drought stress". The detailed methodology describing how the data were analyzed, as well as, the results and discussion are presented in the manuscript.
Source: https://figshare.com/articles/dataset/Phenotypic_and_Genotypic_raw_data_Valdisser_et_al_xlsx/12921437/1
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Feb 19, 2022 Sisi Chen
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This file contains single-cell RNA-seq datasets associated with : Chen, S, et al. 2020. “Dissecting Heterogeneous Cell Populations across Drug and Disease Conditions with PopAlign.” bioRxiv . https://doi.org/10.1101/421354. ------------------------ DATASETS ------------------------ Each data folder includes: barcodes.tsv : cell barcodes genes.tsv : genes [ Name ].mtx : sparse matrix file of transcript counts Subfolders MM1-MM4: --------------- 22,294 Peripheral Blood Mononuclear Cells...
Source: https://figshare.com/articles/dataset/PopAlign_Data/11837097/3
Dataset including questionnaire results and physiological linkage indices for 38 couples of participants in a randomized controlled study. Nineteen couples were in the control condition and nineteen in the mediation condition. CC0 Waiver
Source: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/SVXIPH&version=1.0
Academic Data and Datasets
Feb 19, 2022 Daniel Leventhal; Alexandra Bova
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Rat 0183, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
Source: https://figshare.com/articles/dataset/R0183_20170811a_videos/13070594/1
Academic Data and Datasets
Feb 19, 2022 Jiong Yang; Wenqing Zhang; Yuxiang Wang; Xin Li; Mingjia Yao; Ye Sheng; Haiyang Huo; Lili Xi
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The output files of MIP3D.
Source: https://springernature.figshare.com/articles/dataset/Output_files_part18_/14464971/1
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Feb 19, 2022 Robert Sinkovits
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Synthetic T cell receptor beta chain repertoire generated using IGoR software. Record format: V-gene D-gene J-gene amino-acid-CDR3 Where CDR3 contains anchor residues (V-gene Cys, J-gene Phe/Val)
Source: https://figshare.com/articles/dataset/tcr_beta_synrep_set1_06_txt_bz2/12413465/1
Academic Data and Datasets
Feb 19, 2022 Luke Gregor; Laique Djeutchouang; Alice Lebehot; Schalk Kok; Pedro M S Monteiro
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An update to the original CSIR-ML6 method. The following changes have been made: SOCATv2020 is used; ERA5 wind data and MSLP are used (instead of ERA interim). NETCDF FILE spco2 = surface pCO2 for the ensemble average spco2_ensemble = individual ensemble members of spco2 fgco2 = air-sea CO2 fluxes area_mask = the area per pixel - doubles as mask for the data CSV FILES - fluxes annually resampled fluxes (PgC/yr) for global, >30N, 30N - 30S,
Source: https://figshare.com/articles/dataset/Global_surface_ocean_pCO2_from_CSIR-ML6_2020a_/12652100/8
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100-dimensional word2vec CBOW negative sampling word embeddings for the Cyrillic Uzbek language. Trained using the webcrawl corpus v1.
Source: https://figshare.com/articles/dataset/uzb-cyrl-webcrawl-v1-word2vec-cbow-ns-100d/12991472/2
Academic Data and Datasets
Feb 19, 2022 Kresten Lindorff-Larsen
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Trajectories dataTrajectories of WW domain
Source: https://figshare.com/articles/dataset/GTT-1-protein-081_dcd/12162654/1
Academic Data and Datasets
Feb 19, 2022 Mike R. James; Gilles Antoniazza
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James et al. (2020) - Mitigating systematic error in topographic models for geomorphic change detection: Accuracy, precision and considerations beyond off-nadir imagery UAV-collected image dataset and associated image coordinates of GCP observations for surveys of la Borgne d'Arolla. See paper for details. 60m_10degr_3 : UAV image data File formats for image observations: .xml file contains GCP image observations (and other data) exported from Photoscan v1.4.2. Can be imported back into...
Source: https://figshare.com/articles/dataset/James_et_al_2020_BdA_60m_10degr_3/11786754/1
Academic Data and Datasets
Feb 19, 2022 Hylke E. Beck; Seth Westra; Jackson Tan; Florian Pappenberger; George J. Huffman; Tim R. McVicar; Gaby J. Grundemann; Noemi Vergopolan; Hayley J. Fowler; Elizabeth Lewis; Koen Verbist; Eric F. Wood
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The Precipitation Probability DISTribution (PPDIST) dataset represents a collection of global high-resolution (0.1°) observation-based climatologies (1979–2018) of the occurrence and peak intensity of precipitation at daily and 3-hourly time scales. For more details, please see the following open-access paper: Beck, H. E., Westra, S., Tan, J., Pappenberger, F., Huffman, G. J., McVicar, T. R., Gründemann, G. J., Vergopolan, N., Fowler, H. J., Lewis, E., Verbist, K., and Wood, E. F.: PPDIST:...
Source: https://figshare.com/articles/dataset/PPDIST_Global_observation-based_precipitation_probability_distribution_climatologies/12317219/4
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Feb 19, 2022 Yechao Yan; Yangyang Xu; Shuping Yue
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Daily files of human thermal-stress indices for May 2001 over South and East Asia
Source: https://springernature.figshare.com/articles/dataset/HiTiSEA_2001-05/14569710/1
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Feb 19, 2022 Raymond Haggerty
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Contains all the input and output files used to generate figure 4 Revision_IN_[motif].mat are the input files for each biologically relevant motif. OUT_[motif].mat are the output files run through MISC corresponding to each of the input files.
Source: https://figshare.com/articles/dataset/Figure_4_Reproduction_Files/12648905/1
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Feb 19, 2022 Martin Jinye Zhang
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Toy data for the diversity score analysis in Tabula Muris Senis
Source: https://figshare.com/articles/dataset/Diversity_score_toy_data/11340128/1
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Feb 19, 2022 Jinxi Huo
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RNA-seq of B16F10 cells. S303, S304, S305 are SH-1, SH-2, SH-3. S306, S307, S308 are CK-1, CK-2, CK-3
Source: https://figshare.com/articles/dataset/RNA-seq_raw_data_of_B16F10_cells_/12792491/1
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Feb 19, 2022 Eiru Kim
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DepMap 2018 Q4 data processed with JACKS
Source: https://figshare.com/articles/dataset/Table_DepMap2018Q4_JACKS_txt/12317708/1
Academic Data and Datasets
Feb 19, 2022 Kamil Khanipov; George Golovko; Yuriy Fofanov
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Multidimensional Patterns in Oral Microbiome Data
Source: https://figshare.com/articles/dataset/Multidimensional_Patterns_in_Oral_Microbiome_Data/15075162/2